Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | ARC77_RS20310 | Not Available | Negative | 3982977 - 3984695 | 63655.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | ARC77_RS20315 | Not Available | Negative | 3984806 - 3985513 | 26379.8 |
| rcs stress response system protein rcsf | ARC77_RS20320 | Not Available | Negative | 3985510 - 3985914 | 14178.3 |
| methionine abc transporter substrate-binding lipoprotein metq | ARC77_RS20325 | Not Available | Negative | 3986032 - 3986847 | 29418.2 |
| methionine abc transporter permease meti | ARC77_RS20330 | Not Available | Negative | 3986887 - 3987540 | 23243.6 |
| methionine abc transporter atp-binding protein metn | ARC77_RS20335 | Not Available | Negative | 3987533 - 3988564 | 37804.7 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | ARC77_RS20340 | Not Available | Positive | 3988752 - 3989327 | 21295.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3989691 - 3991232 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 3991301 - 3991377 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3991420 - 3991495 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





