Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yadx | ARC77_RS33630 | Not Available | Positive | 3941836 - 3941883 | 1806.13 |
| h(+)/cl(-) exchange transporter clca | ARC77_RS20120 | Not Available | Positive | 3941895 - 3943316 | 50337.9 |
| small protein yadw | ARC77_RS32910 | Not Available | Positive | 3943340 - 3943405 | 2329.94 |
| iron-sulfur cluster insertion protein erpa | ARC77_RS20125 | Not Available | Positive | 3943398 - 3943742 | 12101.2 |
| tric cation channel family protein | ARC77_RS20130 | Not Available | Negative | 3943789 - 3944412 | 22110.1 |
| vitamin b12 abc transporter substrate-binding protein btuf | ARC77_RS20135 | Not Available | Negative | 3944450 - 3945250 | 29395.4 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | ARC77_RS20140 | Not Available | Negative | 3945243 - 3945941 | 24355.4 |
| dgtpase | ARC77_RS20145 | Not Available | Positive | 3946025 - 3947542 | 59326.1 |
| serine endoprotease degp | ARC77_RS20150 | Not Available | Positive | 3947672 - 3949096 | 49373.3 |
| dna-binding transcriptional regulator cdar | ARC77_RS20155 | Not Available | Positive | 3949251 - 3950408 | 43688.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





