Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypoxanthine phosphoribosyltransferase | ARC77_RS19965 | Not Available | Positive | 3908392 - 3908928 | 20116.4 |
| carbonate dehydratase | ARC77_RS19970 | Not Available | Negative | 3908969 - 3909631 | 25156.3 |
| abc transporter atp-binding protein | ARC77_RS19975 | Not Available | Positive | 3909740 - 3910666 | 34662.2 |
| abc transporter permease | ARC77_RS19980 | Not Available | Positive | 3910663 - 3911433 | 28517.9 |
| pts sugar transporter subunit iia | ARC77_RS19985 | Not Available | Positive | 3911538 - 3911978 | 16569.1 |
| polysaccharide deacetylase family protein | ARC77_RS19990 | Not Available | Positive | 3912042 - 3913271 | 46442.9 |
| aspartate 1-decarboxylase | ARC77_RS19995 | Not Available | Negative | 3913275 - 3913655 | 13834.5 |
| recombination-promoting nuclease rpnc | ARC77_RS20000 | Not Available | Positive | 3913929 - 3914825 | 34648.8 |
| pantoate--beta-alanine ligase | ARC77_RS20005 | Not Available | Negative | 3915124 - 3915975 | 31569.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | ARC77_RS20010 | Not Available | Negative | 3915987 - 3916781 | 28311.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





