Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetaine/carnitine-coa ligase | ARC77_RS19515 | Not Available | Negative | 3803271 - 3804824 | 58617.4 |
| l-carnitine coa-transferase | ARC77_RS19520 | Not Available | Negative | 3804898 - 3806115 | 45071.2 |
| crotonobetainyl-coa dehydrogenase | ARC77_RS19525 | Not Available | Negative | 3806244 - 3807386 | 42560.8 |
| l-carnitine/gamma-butyrobetaine antiporter | ARC77_RS19530 | Not Available | Negative | 3807417 - 3808931 | 56584.4 |
| electron transfer flavoprotein fixa | ARC77_RS19535 | Not Available | Positive | 3809405 - 3810175 | 27145.2 |
| electron transfer flavoprotein subunit alpha/fixb family protein | ARC77_RS19540 | Not Available | Positive | 3810190 - 3811131 | 33515.1 |
| fad-dependent oxidoreductase | ARC77_RS19545 | Not Available | Positive | 3811182 - 3812468 | 45718.6 |
| ferredoxin-like protein fixx | ARC77_RS19550 | Not Available | Positive | 3812465 - 3812752 | 10479.5 |
| mfs transporter | ARC77_RS19555 | Not Available | Positive | 3812810 - 3814141 | 48683.9 |
| glutathione-regulated potassium-efflux system oxidoreductase keff | ARC77_RS19560 | Not Available | Positive | 3814249 - 3814779 | 20205.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





