Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:alanine symporter family protein | ARC77_RS19345 | Not Available | Negative | 3769139 - 3770569 | 51689.0 |
| transaldolase | ARC77_RS19350 | Not Available | Positive | 3770848 - 3771801 | 35221.2 |
| molybdopterin adenylyltransferase | ARC77_RS19355 | Not Available | Positive | 3771916 - 3772503 | 21223.6 |
| acetate uptake transporter | ARC77_RS19360 | Not Available | Negative | 3772538 - 3773104 | 20130.2 |
| acidic protein msyb | ARC77_RS19365 | Not Available | Negative | 3773253 - 3773966 | 26682.5 |
| duf2541 family protein | ARC77_RS19370 | Not Available | Negative | 3773992 - 3774396 | 14466.4 |
| molecular chaperone dnak | ARC77_RS19375 | Not Available | Positive | 3774773 - 3776689 | 69118.9 |
| molecular chaperone dnaj | ARC77_RS19380 | Not Available | Positive | 3776778 - 3777908 | 41046.7 |
| type i toxin-antitoxin system toxin mokc | ARC77_RS19385 | Not Available | Negative | 3778012 - 3778164 | 5529.95 |
| na+/h+ antiporter nhaa | ARC77_RS19390 | Not Available | Positive | 3778750 - 3779916 | 41376.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





