Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | ARC77_RS18805 | Not Available | Positive | 3662791 - 3663330 | 19315.3 |
| type 1 fimbria chaperone fimc | ARC77_RS18810 | Not Available | Positive | 3663367 - 3664092 | 26644.5 |
| fimbrial usher fimd | ARC77_RS18815 | Not Available | Positive | 3664159 - 3666795 | 96602.9 |
| type 1 fimbria minor subunit fimf | ARC77_RS18820 | Not Available | Positive | 3666805 - 3667335 | 18716.3 |
| type 1 fimbria minor subunit fimg | ARC77_RS18825 | Not Available | Positive | 3667348 - 3667851 | 17385.4 |
| type 1 fimbria d-mannose specific adhesin fimh | ARC77_RS18830 | Not Available | Positive | 3667871 - 3668773 | 31447.1 |
| gluconate permease gntp | ARC77_RS18835 | Not Available | Negative | 3668947 - 3670290 | 47141.0 |
| mannonate dehydratase | ARC77_RS18845 | Not Available | Positive | 3670630 - 3671814 | 44807.4 |
| fructuronate reductase | ARC77_RS18850 | Not Available | Positive | 3671895 - 3673355 | 53659.3 |
| uxu operon transcriptional regulator | ARC77_RS18860 | Not Available | Positive | 3673570 - 3674343 | 29291.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





