Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactofuranose abc transporter substrate-binding protein ytfq | ARC77_RS18420 | Not Available | Positive | 3567218 - 3568174 | 34332.5 |
| duf1441 family protein | ARC77_RS18425 | Not Available | Positive | 3568314 - 3569816 | 55134.3 |
| galactofuranose abc transporter, atp-binding protein ytft | ARC77_RS18430 | Not Available | Positive | 3569830 - 3570852 | 35528.1 |
| galactofuranose abc transporter, permease protein yjff | ARC77_RS18435 | Not Available | Positive | 3570839 - 3571834 | 34965.9 |
| class 1 fructose-bisphosphatase | ARC77_RS18440 | Not Available | Negative | 3571867 - 3572865 | 36768.9 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | ARC77_RS18445 | Not Available | Positive | 3573041 - 3574414 | 49882.0 |
| ribosome biogenesis factor yjga | ARC77_RS18450 | Not Available | Negative | 3574570 - 3575121 | 21360.5 |
| metalloprotease pmba | ARC77_RS18455 | Not Available | Positive | 3575215 - 3576567 | 48372.4 |
| cytochrome b562 | ARC77_RS18460 | Not Available | Positive | 3576751 - 3577137 | 14063.7 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | ARC77_RS18465 | Not Available | Negative | 3577182 - 3577646 | 17446.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





