Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease r | ARC77_RS18170 | Not Available | Positive | 3522173 - 3524614 | 92170.6 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | ARC77_RS18175 | Not Available | Positive | 3524795 - 3525526 | 26558.3 |
| yjfi family protein | ARC77_RS18180 | Not Available | Positive | 3525653 - 3526054 | 14935.8 |
| pspa/im30 family protein | ARC77_RS18185 | Not Available | Positive | 3526073 - 3526771 | 25335.0 |
| yjfk family protein | ARC77_RS18190 | Not Available | Positive | 3526822 - 3527481 | 25095.4 |
| duf350 domain-containing protein | ARC77_RS18195 | Not Available | Positive | 3527499 - 3527897 | 14224.7 |
| duf1190 domain-containing protein | ARC77_RS18200 | Not Available | Positive | 3527907 - 3528545 | 23358.9 |
| glutathionylspermidine synthase family protein | ARC77_RS18205 | Not Available | Positive | 3528548 - 3529711 | 45036.0 |
| isovaleryl-coa dehydrogenase | ARC77_RS18210 | Not Available | Positive | 3529795 - 3531420 | 60555.4 |
| duf1471 family protease activator yjfn | ARC77_RS18215 | Not Available | Negative | 3531537 - 3531812 | 9949.64 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





