Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase amib | ARC77_RS18120 | Not Available | Positive | 3511583 - 3512920 | 48032.0 |
| dna mismatch repair endonuclease mutl | ARC77_RS18125 | Not Available | Positive | 3512930 - 3514777 | 67948.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | ARC77_RS18130 | Not Available | Positive | 3514770 - 3515720 | 35009.1 |
| rna chaperone hfq | ARC77_RS18135 | Not Available | Positive | 3515806 - 3516114 | 11167.0 |
| ribosome rescue gtpase hflx | ARC77_RS18140 | Not Available | Positive | 3516191 - 3517471 | 48329.0 |
| ftsh protease activity modulator hflk | ARC77_RS18145 | Not Available | Positive | 3517557 - 3518816 | 45547.5 |
| protease modulator hflc | ARC77_RS18150 | Not Available | Positive | 3518819 - 3519823 | 37652.0 |
| duf2065 domain-containing protein | ARC77_RS18155 | Not Available | Positive | 3519905 - 3520102 | 7166.26 |
| adenylosuccinate synthase | ARC77_RS18160 | Not Available | Positive | 3520206 - 3521504 | 47347.7 |
| nitric oxide-sensing transcriptional repressor nsrr | ARC77_RS18165 | Not Available | Positive | 3521709 - 3522134 | 15594.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





