Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quaternary ammonium compound efflux smr transporter suge | ARC77_RS18025 | Not Available | Positive | 3492949 - 3493266 | 10901.0 |
| lipocalin blc | ARC77_RS18030 | Not Available | Negative | 3493263 - 3493796 | 19852.7 |
| blaec family class c beta-lactamase | ARC77_RS18035 | Not Available | Negative | 3493884 - 3495017 | 41533.8 |
| fumarate reductase subunit frdd | ARC77_RS18040 | Not Available | Negative | 3495080 - 3495439 | 13107.8 |
| fumarate reductase subunit frdc | ARC77_RS18045 | Not Available | Negative | 3495450 - 3495845 | 15015.8 |
| fumarate reductase iron-sulfur protein | ARC77_RS18050 | Not Available | Negative | 3495856 - 3496590 | 27124.5 |
| fumarate reductase (quinol) flavoprotein subunit | ARC77_RS18055 | Not Available | Negative | 3496583 - 3498391 | 65974.5 |
| elongation factor p--(r)-beta-lysine ligase | ARC77_RS18060 | Not Available | Positive | 3498716 - 3499693 | 36978.1 |
| glutamate/gamma-aminobutyrate family transporter yjem | ARC77_RS18065 | Not Available | Positive | 3499912 - 3501414 | 54693.2 |
| miniconductance mechanosensitive channel mscm | ARC77_RS18070 | Not Available | Negative | 3501565 - 3504888 | 123976.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





