Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na/pi cotransporter family protein | ARC77_RS17190 | Not Available | Positive | 3325837 - 3327468 | 59449.6 |
| dipeptidase pepe | ARC77_RS17195 | Not Available | Negative | 3327559 - 3328248 | 24571.7 |
| l-sorbose 1-phosphate reductase | ARC77_RS17205 | Not Available | Negative | 3328631 - 3329860 | 44777.3 |
| pts system mannose/fructose/sorbose family transporter subunit iid | ARC77_RS17210 | Not Available | Negative | 3329912 - 3330736 | 29455.8 |
| pts mannose/fructose/sorbose transporter subunit iic | ARC77_RS17215 | Not Available | Negative | 3330747 - 3331544 | 27929.0 |
| pts system mannose/fructose/n-acetylgalactosamine-transporter subunit iib | ARC77_RS17220 | Not Available | Negative | 3331610 - 3332104 | 18453.3 |
| mannose/fructose/sorbose pts transporter subunit iia | ARC77_RS17225 | Not Available | Negative | 3332104 - 3332511 | 14827.0 |
| sdr family oxidoreductase | ARC77_RS17230 | Not Available | Negative | 3332521 - 3333327 | 29024.7 |
| sugar-binding transcriptional regulator | ARC77_RS17235 | Not Available | Negative | 3333397 - 3334344 | 35017.9 |
| 23s rrna pseudouridine(2604) synthase rluf | ARC77_RS17240 | Not Available | Positive | 3334692 - 3335564 | 32406.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





