Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | 28RC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1377407 bp
Thymine Count
1371115 bp
Guanine Count
1411082 bp
Cytosine Count
1402094 bp
Genome Length
5561698 bp
Protein-coding Genes
4589 genes
Non-Coding Genes
1027 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clpxp protease specificity-enhancing factor | ARC77_RS12560 | Not Available | Negative | 2398736 - 2399233 | 18263.4 |
| stringent starvation protein sspa | ARC77_RS12565 | Not Available | Negative | 2399239 - 2399877 | 24306.3 |
| 30s ribosomal protein s9 | ARC77_RS12570 | Not Available | Negative | 2400272 - 2400664 | 14857.1 |
| 50s ribosomal protein l13 | ARC77_RS12575 | Not Available | Negative | 2400680 - 2401108 | 16019.5 |
| cell division protein zape | ARC77_RS12580 | Not Available | Negative | 2401327 - 2402454 | 43066.0 |
| z-ring associated protein zapg | ARC77_RS12585 | Not Available | Positive | 2402648 - 2403046 | 14961.7 |
| serine endoprotease degq | ARC77_RS12590 | Not Available | Positive | 2403200 - 2404567 | 47238.0 |
| outer membrane-stress sensor serine endopeptidase degs | ARC77_RS12595 | Not Available | Positive | 2404657 - 2405724 | 37583.4 |
| malate dehydrogenase | ARC77_RS12600 | Not Available | Negative | 2405788 - 2406726 | 32339.2 |
| transcriptional regulator argr | ARC77_RS12605 | Not Available | Positive | 2407161 - 2407631 | 16995.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





