Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | S17-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1169311 bp
Thymine Count
1172641 bp
Guanine Count
1216006 bp
Cytosine Count
1214332 bp
Genome Length
4772290 bp
Protein-coding Genes
4350 genes
Non-Coding Genes
352 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative exonuclease | FGH86_RS08490 | Not Available | Negative | 1764887 - 1765654 | 29247.7 |
| lysis protein ydfd | FGH86_RS08495 | Not Available | Negative | 1765747 - 1765938 | 6842.35 |
| cell division inhibition protein dicb | FGH86_RS08500 | Not Available | Negative | 1765935 - 1766123 | 6964.7 |
| protein ydfc | FGH86_RS08510 | Not Available | Negative | 1766691 - 1766909 | 8350.92 |
| protein ydfb | FGH86_RS23810 | Not Available | Negative | 1766939 - 1767067 | 4688.29 |
| Hypothetical protein | FGH86_RS08515 | Not Available | Negative | 1767069 - 1767224 | 5792.67 |
| Putative transcriptional repressor dica | FGH86_RS08520 | Not Available | Negative | 1767391 - 1767798 | 15656.9 |
| Putative cro anti-repressor | FGH86_RS08525 | Not Available | Positive | 1767882 - 1768112 | 8578.22 |
| protein ydfx | FGH86_RS08530 | Not Available | Positive | 1768096 - 1768374 | 10717.0 |
| protein ydfw | FGH86_RS08535 | Not Available | Positive | 1768409 - 1768558 | 5881.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





