Escherichia coli str. RS571

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain RS571 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain is a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. E. coli RS571 has an optimal growth temperature of 37.0°C, which aligns with the typical mammalian host body temperature, suggesting its adaptation to a host-associated habitat. The species E. coli is widely recognized for its role in the intestinal microbiota of various hosts, where it contributes to nutrient absorption and the maintenance of gut health. While specific details regarding strain RS571's interactions within its host are not provided, its facultative anaerobic metabolism implies a versatile capability to utilize various substrates for energy, which can be advantageous in fluctuating oxygen levels within the host environment. The ability of E. coli RS571 to grow under varying oxygen conditions may allow it to colonize diverse niches within the host, potentially influencing gut microbiome dynamics and host health. This adaptability underscores the ecological significance of E. coli strains, including RS571, in maintaining the stability of microbial communities in host-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainRS571

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli str. RS571
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain RS571 plasmid punnamed3.

Gene Summary

Adenine Count

1066 bp

Thymine Count

1002 bp

Guanine Count

616 bp

Cytosine Count

507 bp

Genome Length

3191 bp

Protein-coding Genes

4 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEJH97_RS26230Not AvailableNegative226338 - 2265959631.16
hypothetical proteinEJH97_RS26235Not AvailableNegative226660 - 22708815909.1
hypothetical proteinEJH97_RS26240Not AvailableNegative227183 - 22756014412.1
flavin reductaseEJH97_RS26245Not AvailableNegative227968 - 22891535300.9
type ii toxin-antitoxin system rele/pare family toxinEJH97_RS26250Not AvailableNegative229158 - 22945411657.9
hypothetical proteinEJH97_RS26255Not AvailableNegative229504 - 22997417692.0
ig-like domain-containing proteinEJH97_RS26260Not AvailableNegative230409 - 23279986440.7
hypothetical proteinEJH97_RS26265Not AvailableNegative233203 - 2334549619.43
hypothetical proteinEJH97_RS26270Not AvailableNegative233487 - 2337299148.25
hypothetical proteinEJH97_RS26280Not AvailableNegative233906 - 23434316244.0

Displaying genes 251 – 260 of 279 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total