Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | DQE83_22140 | Not Available | Positive | 4445016 - 4445507 | 17721.4 |
| Lygf | DQE83_22145 | Not Available | Positive | 4445523 - 4445945 | 15995.5 |
| Hypothetical protein | DQE83_22150 | Not Available | Positive | 4446003 - 4446359 | 14158.0 |
| Hypothetical protein | DQE83_22155 | Not Available | Positive | 4446551 - 4447078 | 19772.8 |
| hypothetical | DQE83_22160 | Not Available | Positive | 4447072 - 4447158 | 3016.73 |
| Hypothetical protein | DQE83_22165 | Not Available | Positive | 4447163 - 4447426 | 10335.2 |
| Regulatory protein rha | DQE83_22170 | Not Available | Positive | 4447599 - 4447979 | 13586.4 |
| Derepression protein | DQE83_22175 | Not Available | Positive | 4447910 - 4448140 | 8997.82 |
| Replication protein a | DQE83_22180 | Not Available | Positive | 4448219 - 4450141 | 72094.6 |
| Hypothetical protein | DQE83_22185 | Not Available | Positive | 4450349 - 4450537 | 6933.51 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





