Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | DQE83_29145 | Not Available | Negative | 5370397 - 5370601 | 7358.75 |
| hypothetical protein | DQE83_29150 | Not Available | Positive | 5370602 - 5370834 | 8690.55 |
| hypothetical protein | DQE83_29160 | Not Available | Negative | 5371068 - 5371299 | 7981.6 |
| 1,4-beta-xylanase | DQE83_29165 | Not Available | Negative | 5371534 - 5371764 | 8899.49 |
| mechanosensitive channel protein | DQE83_29170 | Not Available | Positive | 5371766 - 5371997 | 8725.98 |
| hypothetical protein | DQE83_29175 | Not Available | Positive | 5371998 - 5372229 | 8362.19 |
| yebc/pmpr family dna-binding transcriptional regulator | DQE83_29180 | Not Available | Positive | 5372230 - 5372461 | 8799.9 |
| hflk protein | DQE83_29185 | Not Available | Positive | 5373158 - 5373389 | 8419.97 |
| p-type 1 | DQE83_29190 | Not Available | Positive | 5373390 - 5373621 | 8183.89 |
| dna-binding response regulator | DQE83_29195 | Not Available | Positive | 5373622 - 5373815 | 7164.65 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





