Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 68 - 183 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 92 - 3015 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 313 - 428 | Not Available |
| replication protein | DQE83_00005 | Not Available | Negative | 1 - 576 | 21198.9 |
| hypothetical protein | DQE83_00010 | Not Available | Negative | 720 - 983 | 9718.99 |
| is110 family transposase | DQE83_00015 | Not Available | Negative | 987 - 1940 | 35098.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | DQE83_00020 | Not Available | Positive | 2140 - 5007 | 99735.6 |
| pts-dependent dihydroxyacetone kinase operon transcriptional regulator dhar | DQE83_00025 | Not Available | Negative | 5107 - 7026 | 70543.9 |
| dihydroxyacetone kinase subunit dhak | DQE83_00030 | Not Available | Positive | 7254 - 8324 | 38230.5 |
| dihydroxyacetone kinase subunit l | DQE83_00035 | Not Available | Positive | 8335 - 8967 | 22537.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





