Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative terminase large subunit | DQE83_25515 | Not Available | Positive | 4976564 - 4976883 | 12151.6 |
| Tail component | DQE83_25520 | Not Available | Positive | 4977000 - 4977392 | 13170.9 |
| Hypothetical bacteriophage protein | DQE83_25525 | Not Available | Negative | 4977546 - 4978073 | 18194.8 |
| Tail:host specificity protein | DQE83_25530 | Not Available | Positive | 4978210 - 4979491 | 45005.8 |
| Host specificity protein | DQE83_25535 | Not Available | Positive | 4979673 - 4980337 | 23619.8 |
| Putative tail fiber protein | DQE83_25540 | Not Available | Positive | 4980447 - 4981231 | 26752.3 |
| Tail fiber protein | DQE83_25545 | Not Available | Positive | 4981315 - 4981845 | 19282.6 |
| Truncated transposase | DQE83_25550 | Not Available | Positive | 4982257 - 4982622 | 13354.2 |
| Transposase | DQE83_25555 | Not Available | Positive | 4982622 - 4982969 | 13115.0 |
| Transposase | DQE83_25560 | Not Available | Positive | 4983003 - 4983680 | 24585.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





