Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine decarboxylase | DQE83_03755 | Not Available | Positive | 730109 - 732085 | 73989.9 |
| hypothetical protein | DQE83_03760 | Not Available | Positive | 732231 - 732962 | 26276.6 |
| agmatinase | DQE83_03765 | Not Available | Positive | 733098 - 734018 | 33558.9 |
| metalloprotease | DQE83_03770 | Not Available | Negative | 734161 - 734919 | 26844.9 |
| transketolase | DQE83_03775 | Not Available | Positive | 735197 - 737188 | 72259.7 |
| pts mannitol transporter subunit iia | DQE83_03780 | Not Available | Positive | 737502 - 737945 | 16035.2 |
| pts mannitol transporter subunit iibc | DQE83_03785 | Not Available | Positive | 737973 - 739361 | 48937.0 |
| l-sorbose 1-phosphate reductase | DQE83_03790 | Not Available | Positive | 739376 - 740653 | 45995.1 |
| fructose-bisphosphatase class ii | DQE83_03795 | Not Available | Positive | 740650 - 741615 | 34323.5 |
| transcriptional regulator | DQE83_03800 | Not Available | Positive | 741637 - 742146 | 19242.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





