Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 705728 - 705803 | Not Available |
| hypothetical protein | DQE83_03610 | Not Available | Negative | 705909 - 706616 | 24675.5 |
| ornithine decarboxylase | DQE83_03615 | Not Available | Positive | 706948 - 709083 | 79426.5 |
| nucleoside permease nupg | DQE83_03620 | Not Available | Negative | 709132 - 710388 | 46377.9 |
| membrane-bound lytic murein transglycosylase mltc | DQE83_03625 | Not Available | Negative | 710591 - 711670 | 40112.8 |
| fe(2+)-trafficking protein | DQE83_03630 | Not Available | Negative | 711734 - 712009 | 10953.2 |
| a/g-specific adenine glycosylase | DQE83_03635 | Not Available | Negative | 712037 - 713089 | 39255.4 |
| adenine glycosylase | DQE83_03640 | Not Available | Negative | 713043 - 713180 | 4915.0 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DQE83_03645 | Not Available | Positive | 713250 - 713969 | 27308.9 |
| duf469 domain-containing protein | DQE83_03650 | Not Available | Positive | 713969 - 714295 | 12881.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





