Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspd | DQE83_03555 | Not Available | Positive | 696108 - 698168 | 74192.1 |
| type ii secretion system protein gspe | DQE83_03560 | Not Available | Positive | 698168 - 699661 | 55290.8 |
| type ii secretion system protein gspf | DQE83_03565 | Not Available | Positive | 699661 - 700884 | 44966.8 |
| type ii secretion system protein gspg | DQE83_03570 | Not Available | Positive | 700874 - 701356 | 17798.2 |
| type ii secretion system protein gsph | DQE83_03575 | Not Available | Positive | 701360 - 701923 | 21174.8 |
| type ii secretion system protein gspi | DQE83_03580 | Not Available | Positive | 701920 - 702291 | 13652.3 |
| type ii secretion system protein gspj | DQE83_03585 | Not Available | Positive | 702288 - 702893 | 22375.4 |
| general secretion pathway protein gspk | DQE83_03590 | Not Available | Positive | 702890 - 703867 | 36542.3 |
| type ii secretion system protein gspl | DQE83_03595 | Not Available | Positive | 703864 - 705042 | 44268.4 |
| type ii secretion system protein | DQE83_03600 | Not Available | Positive | 705044 - 705580 | 20334.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





