Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_03450 | Not Available | Positive | 670006 - 670830 | 31996.7 |
| ytfj family protein | DQE83_03455 | Not Available | Positive | 670842 - 671402 | 20716.1 |
| lps export abc transporter permease lptf | DQE83_03460 | Not Available | Positive | 671433 - 672503 | 39896.1 |
| lps export abc transporter permease lptg | DQE83_03465 | Not Available | Positive | 672500 - 673579 | 39719.4 |
| 8-amino-7-oxononanoate synthase | DQE83_03470 | Not Available | Negative | 673614 - 674786 | 41631.9 |
| acyl carrier protein | DQE83_03475 | Not Available | Negative | 674786 - 675034 | 9417.69 |
| short-chain dehydrogenase | DQE83_03480 | Not Available | Negative | 675066 - 675980 | 33548.2 |
| fatty acyl-amp ligase | DQE83_03485 | Not Available | Negative | 675977 - 677698 | 63139.6 |
| n-acetyltransferase | DQE83_03490 | Not Available | Positive | 678070 - 679212 | 43445.7 |
| transcriptional regulator glcc | DQE83_03495 | Not Available | Negative | 679219 - 679983 | 28812.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





