Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hyad/hybd family hydrogenase maturation endopeptidase | DQE83_03395 | Not Available | Positive | 659779 - 660273 | 17723.8 |
| hydrogenase-2 operon protein hybe | DQE83_03400 | Not Available | Positive | 660266 - 660754 | 17964.7 |
| hydrogenase nickel incorporation protein hybf | DQE83_03405 | Not Available | Positive | 660747 - 661088 | 12698.1 |
| hydrogenase-2 operon protein hybg | DQE83_03410 | Not Available | Positive | 661101 - 661349 | 8808.67 |
| glutathione-dependent disulfide-bond oxidoreductase | DQE83_03415 | Not Available | Negative | 661472 - 662338 | 32297.3 |
| bifunctional glutathionylspermidine amidase/synthase | DQE83_03420 | Not Available | Positive | 662543 - 664402 | 70551.8 |
| low-affinity inorganic phosphate transporter 2 | DQE83_03425 | Not Available | Positive | 664694 - 666193 | 53812.1 |
| thymidylate kinase | DQE83_03430 | Not Available | Negative | 666242 - 666934 | 25377.1 |
| hypothetical protein | DQE83_03435 | Not Available | Positive | 667108 - 667821 | 26361.3 |
| hypothetical protein | DQE83_03440 | Not Available | Positive | 667853 - 668611 | 28157.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





