Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | DQE83_03345 | Not Available | Negative | 650516 - 651400 | 31479.7 |
| tigr00645 family protein | DQE83_03350 | Not Available | Positive | 651591 - 652085 | 18642.3 |
| l-glyceraldehyde 3-phosphate reductase | DQE83_03355 | Not Available | Negative | 652125 - 653165 | 38872.4 |
| dienelactone hydrolase family protein | DQE83_03360 | Not Available | Positive | 653283 - 654209 | 34115.7 |
| duf2623 domain-containing protein | DQE83_03365 | Not Available | Positive | 654328 - 654615 | 10962.1 |
| hypothetical protein | DQE83_03370 | Not Available | Positive | 654612 - 654797 | 6910.34 |
| hydrogenase-2 small chain | DQE83_03375 | Not Available | Positive | 654804 - 655922 | 39654.3 |
| hydrogenase-2 operon protein hyba | DQE83_03380 | Not Available | Positive | 655925 - 656911 | 36005.0 |
| ni/fe-hydrogenase cytochrome b subunit | DQE83_03385 | Not Available | Positive | 656901 - 658079 | 43551.6 |
| hydrogenase-2 large chain | DQE83_03390 | Not Available | Positive | 658076 - 659779 | 62494.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





