Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_03295 | Not Available | Negative | 642411 - 642668 | 9513.58 |
| hypothetical protein | DQE83_03300 | Not Available | Negative | 642719 - 643645 | 34989.0 |
| 2,5-didehydrogluconate reductase dkga | DQE83_03305 | Not Available | Negative | 643845 - 644672 | 31097.4 |
| alcohol dehydrogenase | DQE83_03310 | Not Available | Negative | 644777 - 645940 | 42099.4 |
| arac family transcriptional regulator | DQE83_03315 | Not Available | Positive | 646077 - 647033 | 36030.9 |
| deda family general envelope maintenance protein yghb | DQE83_03320 | Not Available | Negative | 647073 - 647732 | 24135.3 |
| cystathionine beta-lyase | DQE83_03325 | Not Available | Negative | 647872 - 649059 | 43260.8 |
| hypothetical protein | DQE83_03330 | Not Available | Positive | 649163 - 649318 | 5961.34 |
| biopolymer transporter exbb | DQE83_03335 | Not Available | Positive | 649311 - 650045 | 26289.0 |
| biopolymer transporter exbd | DQE83_03340 | Not Available | Positive | 650052 - 650477 | 15513.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





