Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_03195 | Not Available | Negative | 622691 - 622951 | 9946.86 |
| outer membrane protein tolc | DQE83_03200 | Not Available | Negative | 622951 - 624432 | 53742.7 |
| adp-ribose diphosphatase | DQE83_03205 | Not Available | Positive | 624637 - 625266 | 23668.2 |
| duf1249 family protein | DQE83_03210 | Not Available | Positive | 625267 - 625689 | 16549.0 |
| 3',5'-cyclic-amp phosphodiesterase | DQE83_03215 | Not Available | Positive | 625714 - 626541 | 30967.7 |
| esterase yqia | DQE83_03220 | Not Available | Positive | 626541 - 627122 | 21642.7 |
| dna topoisomerase iv subunit b | DQE83_03225 | Not Available | Positive | 627151 - 629043 | 70235.9 |
| quinol monooxygenase ygin | DQE83_03230 | Not Available | Negative | 629091 - 629405 | 11533.1 |
| modulator of drug activity b | DQE83_03235 | Not Available | Negative | 629436 - 630017 | 21892.1 |
| two-component system sensor histidine kinase qsec | DQE83_03240 | Not Available | Negative | 630127 - 631476 | 50226.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





