Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lamb/ycsf family protein | DQE83_02925 | Not Available | Negative | 576929 - 577663 | 25899.1 |
| allophanate hydrolase subunit 2 family protein | DQE83_02930 | Not Available | Negative | 577653 - 578585 | 34466.6 |
| hypothetical protein | DQE83_02935 | Not Available | Negative | 578579 - 579235 | 24017.1 |
| nif3-like dinuclear metal center hexameric protein | DQE83_02940 | Not Available | Negative | 579258 - 580001 | 26894.0 |
| mfs transporter | DQE83_02945 | Not Available | Positive | 580272 - 581753 | 54102.0 |
| deoxyribodipyrimidine photo-lyase | DQE83_02950 | Not Available | Negative | 581902 - 583320 | 53885.2 |
| duf1722 domain-containing protein | DQE83_02955 | Not Available | Negative | 583317 - 583826 | 20402.5 |
| hypothetical protein | DQE83_02970 | Not Available | Negative | 585042 - 585398 | 13641.4 |
| type iv secretion protein rhs | DQE83_02975 | Not Available | Negative | 585400 - 585984 | 21990.1 |
| is3 family transposase | DQE83_02980 | Not Available | Positive | 585985 - 586563 | 22115.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





