Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase iron-sulfur subunit | DQE83_02865 | Not Available | Negative | 564423 - 565139 | 26771.4 |
| succinate dehydrogenase flavoprotein subunit | DQE83_02870 | Not Available | Negative | 565155 - 566921 | 64425.6 |
| succinate dehydrogenase hydrophobic membrane anchor subunit | DQE83_02875 | Not Available | Negative | 566921 - 567268 | 12868.3 |
| succinate dehydrogenase cytochrome b556 subunit | DQE83_02880 | Not Available | Negative | 567262 - 567651 | 14300.0 |
| hypothetical protein | DQE83_02885 | Not Available | Negative | 568187 - 568372 | 6817.23 |
| type ii citrate synthase | DQE83_02890 | Not Available | Positive | 568360 - 569643 | 48017.7 |
| type 1 fimbrial protein | DQE83_02895 | Not Available | Positive | 570036 - 570602 | 19866.1 |
| type 1 fimbrial protein | DQE83_02910 | Not Available | Positive | 573845 - 574906 | 39611.8 |
| abrb family transcriptional regulator | DQE83_02915 | Not Available | Positive | 575059 - 576105 | 36874.1 |
| endonuclease viii | DQE83_02920 | Not Available | Negative | 576102 - 576893 | 29711.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





