Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methylaspartate ammonia-lyase | DQE83_02805 | Not Available | Positive | 549881 - 551251 | 49086.6 |
| duf4387 domain-containing protein | DQE83_02810 | Not Available | Positive | 551248 - 551565 | 11921.4 |
| dicarboxylate/amino acid:cation symporter | DQE83_02815 | Not Available | Positive | 551705 - 553006 | 46178.2 |
| fumarate hydratase | DQE83_02820 | Not Available | Positive | 553114 - 554766 | 60065.5 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DQE83_02825 | Not Available | Positive | 554776 - 555378 | 22373.7 |
| lysr family transcriptional regulator | DQE83_02830 | Not Available | Negative | 555412 - 556317 | 34374.4 |
| succinyl-coa ligase subunit alpha | DQE83_02845 | Not Available | Negative | 557730 - 558599 | 29779.3 |
| succinyl-coa ligase subunit beta | DQE83_02850 | Not Available | Negative | 558599 - 559765 | 41395.1 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | DQE83_02855 | Not Available | Negative | 560040 - 561257 | 44042.0 |
| 2-oxoglutarate dehydrogenase e1 component | DQE83_02860 | Not Available | Negative | 561272 - 564073 | 105140.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





