Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1471 domain-containing protein | DQE83_02395 | Not Available | Positive | 474513 - 474773 | 8568.2 |
| malate/lactate/ureidoglycolate dehydrogenase | DQE83_02400 | Not Available | Negative | 475000 - 476085 | 38899.3 |
| dna-binding protein ybib | DQE83_02405 | Not Available | Negative | 476226 - 477188 | 35108.8 |
| atp-dependent helicase ding | DQE83_02410 | Not Available | Negative | 477216 - 479366 | 81445.9 |
| type iii effector | DQE83_02420 | Not Available | Negative | 479650 - 481662 | 76969.5 |
| atp-dependent rna helicase rhle | DQE83_02425 | Not Available | Negative | 482270 - 483691 | 51776.5 |
| transcriptional regulator | DQE83_02430 | Not Available | Positive | 483920 - 484591 | 25034.2 |
| secretion protein hlyd | DQE83_02435 | Not Available | Positive | 484591 - 485589 | 36418.9 |
| abc transporter atp-binding protein | DQE83_02440 | Not Available | Positive | 485582 - 487318 | 63107.3 |
| inner membrane transport permease ybhs | DQE83_02445 | Not Available | Positive | 487311 - 488444 | 42062.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





