Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_02190 | Not Available | Positive | 428660 - 428944 | 9991.31 |
| multidrug transporter mdfa | DQE83_02195 | Not Available | Negative | 428985 - 430217 | 44377.9 |
| undecaprenyl-diphosphate phosphatase | DQE83_02200 | Not Available | Positive | 430502 - 431098 | 22419.9 |
| dna-binding transcriptional repressor deor | DQE83_02205 | Not Available | Positive | 431156 - 431914 | 28581.6 |
| d-alanyl-d-alanine carboxypeptidase | DQE83_02210 | Not Available | Negative | 431961 - 433163 | 43643.4 |
| glutathione s-transferase | DQE83_02215 | Not Available | Positive | 433410 - 434036 | 23714.4 |
| pqq-dependent sugar dehydrogenase | DQE83_02220 | Not Available | Negative | 434033 - 435148 | 40888.6 |
| biofilm regulator bssr | DQE83_02225 | Not Available | Negative | 435259 - 435642 | 14536.6 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DQE83_02230 | Not Available | Positive | 435855 - 437180 | 49584.6 |
| ggdef domain-containing protein | DQE83_02235 | Not Available | Negative | 437227 - 438555 | 49865.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





