Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_01925 | Not Available | Negative | 378428 - 378715 | 11152.8 |
| hypothetical protein | DQE83_01930 | Not Available | Negative | 378732 - 379118 | 15265.2 |
| hypothetical protein | DQE83_01935 | Not Available | Negative | 379133 - 379444 | 12479.0 |
| alpa family transcriptional regulator | DQE83_01940 | Not Available | Negative | 379457 - 379672 | 8225.05 |
| hypothetical protein | DQE83_01945 | Not Available | Negative | 379921 - 380766 | 32706.5 |
| site-specific integrase | DQE83_01950 | Not Available | Negative | 380800 - 382023 | 45553.1 |
| atp-dependent clp protease atp-binding subunit clpa | DQE83_01955 | Not Available | Negative | 382538 - 384814 | 84211.9 |
| atp-dependent clp protease adaptor clps | DQE83_01960 | Not Available | Negative | 384845 - 385165 | 12179.7 |
| cold-shock protein cspd | DQE83_01965 | Not Available | Positive | 385488 - 385712 | 7969.41 |
| macrolide abc transporter atp-binding protein/permease macb | DQE83_01970 | Not Available | Negative | 385785 - 387731 | 70620.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





