Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate transporter foca | DQE83_01645 | Not Available | Positive | 323212 - 324069 | 30992.6 |
| formate c-acetyltransferase | DQE83_01650 | Not Available | Positive | 324124 - 326406 | 85355.0 |
| pyruvate formate lyase-activating protein | DQE83_01655 | Not Available | Positive | 326598 - 327338 | 28205.9 |
| mfs transporter | DQE83_01670 | Not Available | Negative | 329186 - 330334 | 41462.2 |
| hydrolase | DQE83_01675 | Not Available | Positive | 330649 - 331275 | 23089.5 |
| dimethyl sulfoxide reductase | DQE83_01680 | Not Available | Negative | 331310 - 332173 | 30862.2 |
| dimethyl sulfoxide reductase subunit b | DQE83_01685 | Not Available | Negative | 332175 - 332792 | 22870.1 |
| dimethylsulfoxide reductase subunit a | DQE83_01690 | Not Available | Negative | 332803 - 335247 | 90380.6 |
| serine--trna ligase | DQE83_01695 | Not Available | Negative | 335486 - 336778 | 48416.8 |
| recombination factor protein rara | DQE83_01700 | Not Available | Negative | 336869 - 338212 | 49636.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





