Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| comec family protein | DQE83_01595 | Not Available | Negative | 311095 - 313359 | 84556.0 |
| integration host factor subunit beta | DQE83_01600 | Not Available | Negative | 313566 - 313850 | 10651.8 |
| 30s ribosomal protein s1 | DQE83_01605 | Not Available | Negative | 314010 - 315683 | 61161.5 |
| cytidylate kinase | DQE83_01610 | Not Available | Negative | 315794 - 316477 | 24747.8 |
| metalloprotease | DQE83_01615 | Not Available | Negative | 316650 - 317414 | 26766.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DQE83_01620 | Not Available | Negative | 317583 - 318866 | 46161.6 |
| phosphoserine transaminase | DQE83_01625 | Not Available | Negative | 318937 - 320025 | 39944.6 |
| hypothetical protein | DQE83_01630 | Not Available | Positive | 320070 - 320315 | 9176.02 |
| duf421 domain-containing protein | DQE83_01635 | Not Available | Negative | 320224 - 320916 | 26226.4 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | DQE83_01640 | Not Available | Positive | 321046 - 322806 | 65696.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





