Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partition protein muke | DQE83_01545 | Not Available | Negative | 301353 - 302057 | 26949.0 |
| chromosome partition protein mukf | DQE83_01550 | Not Available | Negative | 302038 - 303360 | 50581.7 |
| trna uridine 5-oxyacetic acid(34) methyltransferase cmom | DQE83_01555 | Not Available | Negative | 303357 - 304142 | 29801.9 |
| envelope biogenesis factor elyc | DQE83_01560 | Not Available | Positive | 304278 - 305057 | 28638.0 |
| hypothetical protein | DQE83_01565 | Not Available | Negative | 305034 - 305927 | 34489.6 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DQE83_01570 | Not Available | Negative | 306081 - 306827 | 27596.1 |
| protein ycar | DQE83_01575 | Not Available | Negative | 306824 - 307006 | 6855.35 |
| winged helix dna-binding protein ycaq | DQE83_01580 | Not Available | Negative | 307058 - 308290 | 47569.5 |
| tetraacyldisaccharide 4'-kinase | DQE83_01585 | Not Available | Negative | 308327 - 309313 | 35562.4 |
| lipid abc transporter permease/atp-binding protein | DQE83_01590 | Not Available | Negative | 309310 - 311058 | 64455.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





