Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_29035 | Not Available | Negative | 5362191 - 5362421 | 8484.21 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DQE83_29040 | Not Available | Positive | 5362426 - 5362660 | 8981.99 |
| amino acid permease | DQE83_29045 | Not Available | Positive | 5362661 - 5362895 | 8785.09 |
| coa transferase | DQE83_29050 | Not Available | Positive | 5363131 - 5363364 | 7781.18 |
| copper resistance protein copz | DQE83_29055 | Not Available | Positive | 5363365 - 5363445 | 3015.55 |
| lactate dehydrogenase | DQE83_29060 | Not Available | Negative | 5363496 - 5363598 | 3626.29 |
| serine hydrolase | DQE83_29065 | Not Available | Negative | 5363599 - 5363832 | 8364.23 |
| 1-pyrroline-5-carboxylate dehydrogenase | DQE83_29075 | Not Available | Negative | 5364067 - 5364300 | 8695.29 |
| pyrimidine (deoxy)nucleoside triphosphate diphosphatase | DQE83_29080 | Not Available | Negative | 5364769 - 5365002 | 8711.17 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DQE83_29085 | Not Available | Positive | 5365471 - 5365704 | 8721.46 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





