Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjcz family sporulation protein | DQE83_28905 | Not Available | Positive | 5350834 - 5350947 | 3714.63 |
| qace family quaternary ammonium compound efflux smr transporter | DQE83_28910 | Not Available | Negative | 5351326 - 5351540 | 7214.26 |
| regulatory protein recx | DQE83_28915 | Not Available | Positive | 5351791 - 5352018 | 9245.89 |
| hypothetical protein | DQE83_28925 | Not Available | Positive | 5352257 - 5352494 | 9084.28 |
| sensor histidine kinase | DQE83_28930 | Not Available | Negative | 5352495 - 5352732 | 8499.19 |
| Trna-pseudo | Not Available | Not Available | Positive | 5353095 - 5353165 | Not Available |
| hypothetical protein | DQE83_28935 | Not Available | Negative | 5352971 - 5353160 | 7185.8 |
| peptidase m28 | DQE83_28945 | Not Available | Positive | 5354399 - 5354635 | 8764.5 |
| hypothetical protein | DQE83_28955 | Not Available | Positive | 5354873 - 5355072 | 7092.35 |
| m18 family aminopeptidase | DQE83_28960 | Not Available | Positive | 5355110 - 5355346 | 8685.41 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





