Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | DQE83_28790 | Not Available | Positive | 5343862 - 5344102 | 8978.44 |
| glsb/yeaq/ymge family stress response membrane protein | DQE83_28795 | Not Available | Negative | 5344103 - 5344174 | 2431.23 |
| gntr family transcriptional regulator | DQE83_28800 | Not Available | Positive | 5344354 - 5344584 | 8897.98 |
| glycine cleavage system protein t | DQE83_28805 | Not Available | Negative | 5344868 - 5345066 | 6812.22 |
| hypothetical protein | DQE83_28810 | Not Available | Negative | 5345067 - 5345304 | 8173.73 |
| virulence factor | DQE83_28815 | Not Available | Negative | 5345308 - 5345548 | 9302.01 |
| 3-ketoacyl-acp reductase | DQE83_28820 | Not Available | Positive | 5345549 - 5345789 | 8696.49 |
| hypothetical protein | DQE83_28825 | Not Available | Positive | 5345790 - 5346007 | 8249.48 |
| iron abc transporter permease | DQE83_28830 | Not Available | Negative | 5346031 - 5346270 | 8425.75 |
| m61 family peptidase | DQE83_28835 | Not Available | Positive | 5346271 - 5346510 | 8980.49 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





