Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DQE83_28655 | Not Available | Negative | 5333393 - 5333623 | 8677.7 |
| acyl-coa dehydrogenase | DQE83_28660 | Not Available | Positive | 5333638 - 5333882 | 8521.48 |
| succinate dehydrogenase | DQE83_28665 | Not Available | Positive | 5334242 - 5334367 | 4440.67 |
| cof-type had-iib family hydrolase | DQE83_28670 | Not Available | Negative | 5334373 - 5334495 | 4520.48 |
| glutathionylspermidine synthase | DQE83_28685 | Not Available | Negative | 5335108 - 5335352 | 9304.26 |
| chorismate mutase | DQE83_28690 | Not Available | Negative | 5335353 - 5335597 | 9567.92 |
| Trna-tyr | Not Available | Not Available | Positive | 5336239 - 5336324 | Not Available |
| pur operon repressor | DQE83_28700 | Not Available | Negative | 5336576 - 5336769 | 7637.45 |
| hypothetical protein | DQE83_28710 | Not Available | Positive | 5338040 - 5338283 | 8697.95 |
| peptidase p60 | DQE83_28725 | Not Available | Positive | 5339743 - 5339985 | 8931.35 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





