Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DQE83_28605 | Not Available | Positive | 5330275 - 5330446 | 6714.12 |
| rod shape-determining protein roda | DQE83_28610 | Not Available | Negative | 5330693 - 5330938 | 8848.31 |
| s9 family peptidase | DQE83_28615 | Not Available | Positive | 5330939 - 5331184 | 9128.79 |
| hypothetical protein | DQE83_28620 | Not Available | Positive | 5331185 - 5331430 | 9427.48 |
| protein kinase | DQE83_28625 | Not Available | Positive | 5331434 - 5331676 | 8790.68 |
| dna polymerase iii subunit gamma/tau | DQE83_28630 | Not Available | Positive | 5331677 - 5331922 | 9390.04 |
| hypothetical protein | DQE83_28635 | Not Available | Positive | 5331923 - 5332167 | 9351.93 |
| ribonucleotide-diphosphate reductase subunit alpha | DQE83_28640 | Not Available | Negative | 5332168 - 5332412 | 9247.08 |
| nad(p)h-quinone dehydrogenase | DQE83_28645 | Not Available | Positive | 5332658 - 5332902 | 8598.42 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DQE83_28650 | Not Available | Positive | 5332903 - 5333147 | 8474.09 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





