Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tolr | DQE83_28540 | Not Available | Positive | 5325266 - 5325391 | 4473.62 |
| hypothetical protein | DQE83_28545 | Not Available | Positive | 5325514 - 5325760 | 9480.46 |
| diaminopimelate decarboxylase | DQE83_28550 | Not Available | Positive | 5326008 - 5326254 | 9311.2 |
| abc transporter atp-binding protein | DQE83_28555 | Not Available | Negative | 5326749 - 5326995 | 9442.37 |
| hypothetical protein | DQE83_28565 | Not Available | Positive | 5327490 - 5327736 | 9088.86 |
| hypothetical protein | DQE83_28580 | Not Available | Negative | 5328725 - 5328970 | 9600.79 |
| is3 family transposase | DQE83_28585 | Not Available | Negative | 5328971 - 5329216 | 9333.0 |
| tlya family rna methyltransferase | DQE83_28590 | Not Available | Negative | 5329217 - 5329462 | 9334.62 |
| integrase | DQE83_28595 | Not Available | Positive | 5329463 - 5329708 | 9440.09 |
| mfs transporter | DQE83_28600 | Not Available | Negative | 5329709 - 5329954 | 8745.95 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





