Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit c | DQE83_28420 | Not Available | Positive | 5317592 - 5317796 | 7713.91 |
| yggs family pyridoxal phosphate enzyme | DQE83_28430 | Not Available | Negative | 5318047 - 5318118 | 2670.22 |
| twitching motility protein pilt | DQE83_28435 | Not Available | Positive | 5318156 - 5318296 | 5220.42 |
| atp:cob(i)alamin adenosyltransferase | DQE83_28440 | Not Available | Negative | 5318297 - 5318439 | 5076.07 |
| fad:protein fmn transferase apbe | DQE83_28445 | Not Available | Negative | 5318547 - 5318796 | 8858.33 |
| sodium:alanine symporter | DQE83_28450 | Not Available | Positive | 5318797 - 5319046 | 8740.03 |
| hypothetical protein | DQE83_28460 | Not Available | Positive | 5319797 - 5320046 | 8591.44 |
| vapc toxin family pin domain ribonuclease | DQE83_28465 | Not Available | Positive | 5320047 - 5320295 | 8720.37 |
| phosphoglucomutase, alpha-d-glucose phosphate-specific | DQE83_28470 | Not Available | Positive | 5320296 - 5320544 | 8384.95 |
| 30s ribosomal protein s1 | DQE83_28475 | Not Available | Positive | 5320545 - 5320793 | 8704.32 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





