Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter | DQE83_28050 | Not Available | Negative | 5293237 - 5293341 | 4234.37 |
| triose-phosphate isomerase | DQE83_28055 | Not Available | Positive | 5293498 - 5293758 | 9636.8 |
| aspartate aminotransferase family protein | DQE83_28060 | Not Available | Positive | 5294020 - 5294279 | 9188.77 |
| phenazine biosynthesis protein phzf | DQE83_28065 | Not Available | Positive | 5294280 - 5294539 | 10016.7 |
| dihydroorotate dehydrogenase catalytic subunit | DQE83_28075 | Not Available | Positive | 5294822 - 5295059 | 8376.28 |
| carbohydrate abc transporter permease | DQE83_28080 | Not Available | Negative | 5295060 - 5295319 | 9716.12 |
| molecular chaperone dnak | DQE83_28090 | Not Available | Positive | 5295840 - 5296092 | 8146.29 |
| phosphohydrolase | DQE83_28095 | Not Available | Positive | 5296100 - 5296359 | 9118.76 |
| hypothetical protein | DQE83_28100 | Not Available | Positive | 5296620 - 5296878 | 10003.3 |
| mfs transporter | DQE83_28105 | Not Available | Negative | 5296879 - 5297137 | 9165.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





