Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | DQE83_27285 | Not Available | Positive | 5237771 - 5238120 | 12927.5 |
| fructose-bisphosphate aldolase | DQE83_27290 | Not Available | Negative | 5238121 - 5238215 | 3648.44 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DQE83_27295 | Not Available | Negative | 5238363 - 5238468 | 3693.3 |
| heavy metal translocating p-type atpase | DQE83_27300 | Not Available | Positive | 5238469 - 5238816 | 12844.0 |
| serine dehydratase | DQE83_27305 | Not Available | Positive | 5239161 - 5239496 | 12412.8 |
| Trna-arg | Not Available | Not Available | Positive | 5239503 - 5239579 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 5239778 - 5239851 | Not Available |
| hypothetical protein | DQE83_27320 | Not Available | Positive | 5239980 - 5240183 | 7873.7 |
| ring-cleaving dioxygenase | DQE83_27330 | Not Available | Negative | 5240521 - 5240854 | 13042.3 |
| hypothetical protein | DQE83_27335 | Not Available | Negative | 5240905 - 5241087 | 6727.02 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





