Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase alss | DQE83_27220 | Not Available | Positive | 5232754 - 5233116 | 12685.9 |
| leucine dehydrogenase | DQE83_27225 | Not Available | Positive | 5233117 - 5233478 | 13399.7 |
| hypothetical protein | DQE83_27230 | Not Available | Positive | 5233479 - 5233674 | 7374.52 |
| hypothetical protein | DQE83_27235 | Not Available | Positive | 5233684 - 5233840 | 6366.63 |
| type ii and iii secretion system | DQE83_27240 | Not Available | Negative | 5233841 - 5234202 | 12669.0 |
| hypothetical protein | DQE83_27250 | Not Available | Negative | 5234596 - 5234850 | 9474.62 |
| dna invertase | DQE83_27265 | Not Available | Negative | 5236006 - 5236362 | 13278.8 |
| is110 family transposase | DQE83_27270 | Not Available | Negative | 5236858 - 5237070 | 7538.68 |
| hypothetical protein | DQE83_27275 | Not Available | Negative | 5237158 - 5237420 | 9815.08 |
| is110 family transposase | DQE83_27280 | Not Available | Positive | 5237421 - 5237770 | 12925.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





