Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain fatty acid transporter | DQE83_26965 | Not Available | Negative | 5208825 - 5209383 | 20152.2 |
| integrase | DQE83_26970 | Not Available | Negative | 5209384 - 5209532 | 5501.64 |
| citrate lyase subunit alpha | DQE83_26975 | Not Available | Negative | 5209740 - 5209931 | 6944.36 |
| hypothetical protein | DQE83_26985 | Not Available | Negative | 5210488 - 5210978 | 18601.0 |
| hypothetical protein | DQE83_26990 | Not Available | Positive | 5211017 - 5211331 | 11459.4 |
| Trna-pseudo | Not Available | Not Available | Positive | 5211134 - 5211209 | Not Available |
| is66 family transposase | DQE83_26995 | Not Available | Positive | 5211340 - 5211807 | 17663.0 |
| para family protein | DQE83_27000 | Not Available | Negative | 5211838 - 5212051 | 7959.63 |
| replication protein | DQE83_27005 | Not Available | Positive | 5213339 - 5213799 | 17753.2 |
| replication protein | DQE83_27010 | Not Available | Positive | 5213824 - 5214284 | 17702.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





