Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-ii oxidase subunit cbdx | DQE83_01240 | Not Available | Negative | 237161 - 237253 | 3597.68 |
| cytochrome bd-ii ubiquinol oxidase subunit 2 | DQE83_01245 | Not Available | Negative | 237266 - 238402 | 42426.3 |
| cytochrome bd-ii oxidase subunit 1 | DQE83_01250 | Not Available | Negative | 238414 - 239958 | 57996.3 |
| hydrogenase expression/formation protein | DQE83_01255 | Not Available | Negative | 240092 - 240949 | 31400.4 |
| hydrogenase-1 operon protein hyae | DQE83_01260 | Not Available | Negative | 240946 - 241344 | 14904.6 |
| hydrogenase 1 maturation protease | DQE83_01265 | Not Available | Negative | 241341 - 241928 | 21484.6 |
| ni/fe-hydrogenase, b-type cytochrome subunit | DQE83_01270 | Not Available | Negative | 241925 - 242632 | 27612.9 |
| hydrogenase 1 large subunit | DQE83_01275 | Not Available | Negative | 242651 - 244444 | 66287.1 |
| hydrogenase-1 small chain | DQE83_01280 | Not Available | Negative | 244441 - 245559 | 40683.6 |
| Trna-ser | Not Available | Not Available | Positive | 245985 - 246072 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





