Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase subunit c | DQE83_25290 | Not Available | Negative | 4940171 - 4940743 | 20322.4 |
| k(+)-transporting atpase subunit b | DQE83_25295 | Not Available | Negative | 4940752 - 4942800 | 72225.6 |
| potassium-transporting atpase subunit kdpa | DQE83_25300 | Not Available | Negative | 4942823 - 4944496 | 59057.6 |
| potassium-transporting atpase subunit f | DQE83_25305 | Not Available | Negative | 4944496 - 4944585 | 3041.92 |
| duf2517 family protein | DQE83_25310 | Not Available | Positive | 4944898 - 4945104 | 8275.0 |
| duf1795 domain-containing protein | DQE83_25315 | Not Available | Positive | 4945888 - 4946088 | 7757.47 |
| type iv secretion protein rhs | DQE83_25320 | Not Available | Positive | 4946107 - 4946943 | 29415.7 |
| protein repa | DQE83_25340 | Not Available | Positive | 4948233 - 4949210 | 37181.8 |
| site-specific integrase | DQE83_25345 | Not Available | Negative | 4949497 - 4950237 | 28174.5 |
| hypothetical protein | DQE83_25350 | Not Available | Negative | 4952693 - 4953088 | 14720.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





