Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| positive regulator of repfic repa1 expression | DQE83_25225 | Not Available | Negative | 4928757 - 4928831 | 2699.38 |
| replication protein repa | DQE83_25230 | Not Available | Positive | 4928898 - 4929023 | 4634.62 |
| replication protein repa | DQE83_25235 | Not Available | Negative | 4929064 - 4929321 | 9613.65 |
| gnat family n-acetyltransferase | DQE83_25240 | Not Available | Negative | 4929631 - 4930113 | 17690.5 |
| hypothetical protein | DQE83_25245 | Not Available | Negative | 4930104 - 4930394 | 11209.3 |
| type i toxin-antitoxin system hok family toxin | DQE83_25250 | Not Available | Negative | 4930728 - 4930877 | 5573.03 |
| type-f conjugative transfer system pilin acetylase trax | DQE83_25260 | Not Available | Negative | 4931263 - 4932009 | 27390.5 |
| hypothetical protein | DQE83_25275 | Not Available | Positive | 4936214 - 4936708 | 18396.2 |
| dna-binding response regulator | DQE83_25280 | Not Available | Negative | 4936820 - 4937497 | 25409.7 |
| two-component system sensor histidine kinase kdbd | DQE83_25285 | Not Available | Negative | 4937494 - 4940178 | 98734.2 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





