Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | HPCN26 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1359008 bp
Thymine Count
1364318 bp
Guanine Count
1328836 bp
Cytosine Count
1338252 bp
Genome Length
5390414 bp
Protein-coding Genes
5232 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DQE83_24935 | Not Available | Negative | 4887854 - 4888318 | 17470.9 |
| pilus assembly protein | DQE83_24940 | Not Available | Negative | 4888353 - 4888943 | 20528.2 |
| chromosome partitioning protein parb | DQE83_24960 | Not Available | Positive | 4890310 - 4891299 | 37138.1 |
| autotransporter outer membrane beta-barrel domain-containing protein | DQE83_24975 | Not Available | Positive | 4893493 - 4897419 | 141565.0 |
| hypothetical protein | DQE83_24980 | Not Available | Negative | 4897505 - 4897687 | 6741.26 |
| protein sopa | DQE83_24990 | Not Available | Positive | 4898504 - 4899670 | 43690.6 |
| parb/repb/spo0j family plasmid partition protein | DQE83_24995 | Not Available | Positive | 4899670 - 4900641 | 35418.3 |
| antirestriction protein | DQE83_25010 | Not Available | Positive | 4901474 - 4901899 | 16278.4 |
| hypothetical protein | DQE83_25015 | Not Available | Positive | 4901946 - 4902341 | 14566.4 |
| hypothetical protein | DQE83_25050 | Not Available | Positive | 4905007 - 4905666 | 23394.4 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





